Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mauEMethylamine utilization protein MauE. (182 aa)    
Predicted Functional Partners:
mauB
Methylamine dehydrogenase heavy chain precursor.
 
   
 0.959
mauD
Methylamine utilization protein MauD.
 
     0.931
mauA
Methylamine dehydrogenase light chain precursor; Belongs to the aromatic amine dehydrogenase light chain family.
 
     0.924
mauN
Polyferredoxin NapH/MauN (periplasmic nitrate reductase).
 
     0.656
mauM
Ferredoxin-type protein NapG/MauM (periplasmic nitrate reductase).
 
     0.645
mauG
Cytochrome c551 peroxidase.
 
     0.602
mauF
Methylamine utilization protein mauF.
       0.593
mauL
Methylamine utilization protein mauL.
       0.449
mgdD
N-methyl glutamate dehydrogenase/oxidoreductase subunit D.
  
     0.426
LP43_1080
Putative transcriptional regulator.
  
     0.408
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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