Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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co-expression
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gene co-occurrence
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[Homology]
Score
LP43_1104Na(+) H(+) antiporter subunit F. (89 aa)    
Predicted Functional Partners:
LP43_1103
Na(+) H(+) antiporter subunit G.
 
 
 0.999
LP43_1107
Na(+) H(+) antiporter subunit C.
 
 
 0.999
LP43_1108
Na(+) H(+) antiporter subunit A/Na(+) H(+) antiporter subunit B.
 
 
 0.999
LP43_1105
Na(+) H(+) antiporter subunit E.
 
 
 0.998
LP43_1106
Na(+) H(+) antiporter subunit D.
 
 
 0.997
LP43_1007
NADH-ubiquinone oxidoreductase chain L.
  
 
 0.823
LP43_1102
Hypothetical protein; Belongs to the UPF0178 family.
       0.774
LP43_1101
Cytochrome B561.
       0.568
nuoB
NADH-ubiquinone oxidoreductase chain B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
   0.548
nuoC
NADH-ubiquinone oxidoreductase chain C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
   
   0.548
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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