Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
LP43_1173Mesaconyl-CoA hydratase. (358 aa)    
Predicted Functional Partners:
LP43_1174
Citryl-CoA-Lyase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.961
LP43_1172
Citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.904
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
  
 
 0.889
LP43_1177
Citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.859
LP43_1220
acyl-CoA dehydrogenase.
 
 0.792
LP43_1170
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 0.762
LP43_0858
Hypothetical protein.
  
 
 0.751
LP43_1178
Acetyl-coenzyme A synthetase.
 
 
 0.749
LP43_0763
Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase.
  
 0.731
LP43_1401
Flavodoxin reductase (ferredoxin-NADPH reductases) family 1/Vanillate O-demethylase oxidoreductase.
  
 
 0.725
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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