Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LP43_1179Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. (296 aa)    
Predicted Functional Partners:
LP43_1180
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
 
  
 0.974
LP43_1177
Citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
       0.628
LP43_1178
Acetyl-coenzyme A synthetase.
       0.628
LP43_1176
Malic enzyme, NAD binding domain protein.
     
 0.546
LP43_0230
Chromosome (plasmid) partitioning protein ParB/Stage 0 sporulation protein J; Belongs to the ParB family.
    
   0.529
LP43_1175
Putative alkanesulfonate metabolism utilization regulator.
       0.514
LP43_0728
Arabinose 5-phosphate isomerase.
  
  
 0.501
glyS
Glycyl-tRNA synthetase beta chain.
 
    0.425
LP43_2313
Putative signal-transduction protein.
  
  
 0.422
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
Server load: low (10%) [HD]