Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
LP43_1209 | LP43_1210 | Cyanoglobin/Hemoglobin-like protein HbN. | Hypothetical protein. | 0.709 |
LP43_1209 | LP43_1211 | Cyanoglobin/Hemoglobin-like protein HbN. | Hypothetical protein. | 0.581 |
LP43_1209 | LP43_1212 | Cyanoglobin/Hemoglobin-like protein HbN. | Methane monooxygenase component C. | 0.570 |
LP43_1209 | LP43_1213 | Cyanoglobin/Hemoglobin-like protein HbN. | Hypothetical protein. | 0.416 |
LP43_1209 | LP43_1214 | Cyanoglobin/Hemoglobin-like protein HbN. | Membrane protein involved in aromatic hydrocarbon degradation. | 0.454 |
LP43_1210 | LP43_1209 | Hypothetical protein. | Cyanoglobin/Hemoglobin-like protein HbN. | 0.709 |
LP43_1210 | LP43_1211 | Hypothetical protein. | Hypothetical protein. | 0.631 |
LP43_1210 | LP43_1212 | Hypothetical protein. | Methane monooxygenase component C. | 0.516 |
LP43_1210 | LP43_1213 | Hypothetical protein. | Hypothetical protein. | 0.447 |
LP43_1211 | LP43_1209 | Hypothetical protein. | Cyanoglobin/Hemoglobin-like protein HbN. | 0.581 |
LP43_1211 | LP43_1210 | Hypothetical protein. | Hypothetical protein. | 0.631 |
LP43_1211 | LP43_1212 | Hypothetical protein. | Methane monooxygenase component C. | 0.635 |
LP43_1211 | LP43_1213 | Hypothetical protein. | Hypothetical protein. | 0.537 |
LP43_1211 | LP43_1214 | Hypothetical protein. | Membrane protein involved in aromatic hydrocarbon degradation. | 0.402 |
LP43_1212 | LP43_1209 | Methane monooxygenase component C. | Cyanoglobin/Hemoglobin-like protein HbN. | 0.570 |
LP43_1212 | LP43_1210 | Methane monooxygenase component C. | Hypothetical protein. | 0.516 |
LP43_1212 | LP43_1211 | Methane monooxygenase component C. | Hypothetical protein. | 0.635 |
LP43_1212 | LP43_1213 | Methane monooxygenase component C. | Hypothetical protein. | 0.658 |
LP43_1212 | LP43_1214 | Methane monooxygenase component C. | Membrane protein involved in aromatic hydrocarbon degradation. | 0.482 |
LP43_1212 | LP43_1215 | Methane monooxygenase component C. | Cyanoglobin/Hemoglobin-like protein HbN. | 0.551 |
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