STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgsCN-methyl glutamate synthase subunit C; Belongs to the glutamate synthase family. (443 aa)    
Predicted Functional Partners:
LP43_0240
Glutamate synthase [NADPH] subunit beta.
 
 0.999
mgsB
N-methyl glutamate synthase subunit B.
  0.999
mgsA
N-methyl glutamate synthase subunit A.
 
 0.994
LP43_0241
Glutamate synthase [NADPH] subunit alpha.
 
0.990
LP43_0196
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.950
mgdC
N-methyl glutamate dehydrogenase/oxidoreductase subunit C; Belongs to the GcvT family.
 
  
 0.942
gmaS
Glutamate-methylamine ligase; Belongs to the glutamine synthetase family.
 
 
 0.918
mgdB
N-methyl glutamate dehydrogenase/oxidoreductase subunit B.
 
  
  0.875
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
 
 0.869
LP43_1428
Transcriptional regulator, MerR family.
 
     0.837
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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