Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gmaSGlutamate-methylamine ligase; Belongs to the glutamine synthetase family. (455 aa)    
Predicted Functional Partners:
LP43_0241
Glutamate synthase [NADPH] subunit alpha.
  
 
 0.984
mgsA
N-methyl glutamate synthase subunit A.
 
  
 0.935
mgdC
N-methyl glutamate dehydrogenase/oxidoreductase subunit C; Belongs to the GcvT family.
 
  
 0.932
mgsB
N-methyl glutamate synthase subunit B.
 
 
 0.921
mgsC
N-methyl glutamate synthase subunit C; Belongs to the glutamate synthase family.
 
 
 0.911
mgdB
N-methyl glutamate dehydrogenase/oxidoreductase subunit B.
 
     0.868
mgdD
N-methyl glutamate dehydrogenase/oxidoreductase subunit D.
 
     0.830
LP43_0264
5-oxoprolinase.
     
  0.828
LP43_1212
Methane monooxygenase component C.
   
 
 0.810
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
 
 0.783
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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