Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LP43_1452 | LP43_1474 | LP43_1452 | LP43_1474 | Oligopeptide transport system permease protein OppB; (TC 3.A.1.5.1). | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | 0.979 |
| LP43_1452 | LP43_2015 | LP43_1452 | LP43_2015 | Oligopeptide transport system permease protein OppB; (TC 3.A.1.5.1). | Oligopeptide transport system permease protein. | 0.998 |
| LP43_1452 | LP43_2016 | LP43_1452 | LP43_2016 | Oligopeptide transport system permease protein OppB; (TC 3.A.1.5.1). | Dipeptide transport ATP-binding protein DppF; (TC 3.A.1.5.2); Belongs to the ABC transporter superfamily. | 0.987 |
| LP43_1471 | LP43_1474 | LP43_1471 | LP43_1474 | Hypothetical protein; Belongs to the UPF0312 family. | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | 0.495 |
| LP43_1471 | leuD | LP43_1471 | LP43_1470 | Hypothetical protein; Belongs to the UPF0312 family. | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.740 |
| LP43_1471 | motA-2 | LP43_1471 | LP43_1473 | Hypothetical protein; Belongs to the UPF0312 family. | Flagellar motor rotation protein MotA. | 0.712 |
| LP43_1471 | motB-2 | LP43_1471 | LP43_1472 | Hypothetical protein; Belongs to the UPF0312 family. | Flagellar motor rotation protein MotB. | 0.757 |
| LP43_1474 | LP43_1452 | LP43_1474 | LP43_1452 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | Oligopeptide transport system permease protein OppB; (TC 3.A.1.5.1). | 0.979 |
| LP43_1474 | LP43_1471 | LP43_1474 | LP43_1471 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | Hypothetical protein; Belongs to the UPF0312 family. | 0.495 |
| LP43_1474 | LP43_1475 | LP43_1474 | LP43_1475 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | Enoyl-[acyl-carrier-protein] reductase [NADH]. | 0.587 |
| LP43_1474 | LP43_1476 | LP43_1474 | LP43_1476 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | Proton/glutamate symport protein/Sodium/glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.538 |
| LP43_1474 | LP43_2015 | LP43_1474 | LP43_2015 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | Oligopeptide transport system permease protein. | 0.977 |
| LP43_1474 | LP43_2016 | LP43_1474 | LP43_2016 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | Dipeptide transport ATP-binding protein DppF; (TC 3.A.1.5.2); Belongs to the ABC transporter superfamily. | 0.868 |
| LP43_1474 | flgG | LP43_1474 | LP43_0609 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | 0.512 |
| LP43_1474 | leuD | LP43_1474 | LP43_1470 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.487 |
| LP43_1474 | motA-2 | LP43_1474 | LP43_1473 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | Flagellar motor rotation protein MotA. | 0.533 |
| LP43_1474 | motB-2 | LP43_1474 | LP43_1472 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | Flagellar motor rotation protein MotB. | 0.505 |
| LP43_1475 | LP43_1474 | LP43_1475 | LP43_1474 | Enoyl-[acyl-carrier-protein] reductase [NADH]. | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | 0.587 |
| LP43_1475 | LP43_1476 | LP43_1475 | LP43_1476 | Enoyl-[acyl-carrier-protein] reductase [NADH]. | Proton/glutamate symport protein/Sodium/glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.566 |
| LP43_1476 | LP43_1474 | LP43_1476 | LP43_1474 | Proton/glutamate symport protein/Sodium/glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Dipeptide-binding ABC transporter, periplasmic substrate-binding component; (TC 3.A.1.5.2). | 0.538 |
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