Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LP43_1553Cysteine desulfurase. (380 aa)    
Predicted Functional Partners:
sufE
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2.
 
 0.995
LP43_1552
Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
 
 
 0.976
LP43_1554
Iron-sulfur cluster regulator IscR.
  
 
 0.964
LP43_0789
Molybdopterin biosynthesis MoeB protein; Belongs to the sulfur carrier protein TusA family.
   
 0.962
LP43_1645
Rhodanese-like domain protein; Belongs to the sulfur carrier protein TusA family.
   
 0.911
LP43_0569
Sulfur carrier protein adenylyltransferase ThiF.
 
 
 0.909
LP43_0858
Hypothetical protein.
  
 0.893
iscR
Iron-sulfur cluster regulator IscR.
  
 
 0.861
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.830
LP43_1212
Methane monooxygenase component C.
  
 0.787
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.