Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
LP43_1572Putative membrane-bound ClpP-class protease. (457 aa)    
Predicted Functional Partners:
LP43_1571
Putative stomatin/prohibitin-family membrane protease subunit.
 
    0.966
LP43_1573
Cyclopropane-fatty-acyl-phospholipid synthase.
       0.658
LP43_1690
Putative activity regulator of membrane protease YbbK.
   
  
 0.546
LP43_1691
Putative stomatin/prohibitin-family membrane protease subunit YbbK.
  
    0.409
LP43_1574
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
       0.407
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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