Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LP43_1697Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (322 aa)    
Predicted Functional Partners:
LP43_1696
Iron(III) ABC transporter, ATP-binding protein.
 
 0.996
LP43_1695
Vitamin B12 ABC transporter, B12-binding component BtuF.
 
 0.993
LP43_2344
Ferrichrome transport ATP-binding protein FhuC; (TC 3.A.1.14.3).
 
 0.984
LP43_2346
Putative periplasmic substrate-binding transport protein.
 
 0.908
LP43_1972
TonB-dependent receptor.
 
  
 0.573
LP43_1693
5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine.
       0.530
LP43_1694
Hypoxanthine-guanine phosphoribosyltransferase.
       0.530
LP43_1698
L,D-transpeptidase YcbB.
       0.529
LP43_1699
Hypothetical protein.
       0.421
selO
Selenoprotein O and cysteine-containing-like; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.
 
      0.414
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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