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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
LP43_1881Putative endonuclease; Belongs to the UPF0102 family. (120 aa)    
Predicted Functional Partners:
LP43_1880
LppC putative lipoprotein.
  
  
 0.845
LP43_1097
ComM-related protein.
 
  
 0.733
LP43_1882
21 kDa hemolysin precursor.
       0.702
LP43_0880
Protein YhgH.
 
    0.682
rsmI
rRNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.675
LP43_0247
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake.
 
    0.617
LP43_0503
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
   
    0.496
LP43_0553
Phosphoheptose isomerase 1.
  
    0.415
LP43_0760
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
   
    0.412
LP43_0761
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
   
    0.412
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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