Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LP43_0293 | LP43_0888 | LP43_0293 | LP43_0888 | Pentapeptide repeat domain protein. | Hypothetical protein. | 0.589 |
| LP43_0293 | LP43_1884 | LP43_0293 | LP43_1884 | Pentapeptide repeat domain protein. | Hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.597 |
| LP43_0372 | LP43_0939 | LP43_0372 | LP43_0939 | Hypothetical protein. | CheW domain protein. | 0.402 |
| LP43_0372 | LP43_1884 | LP43_0372 | LP43_1884 | Hypothetical protein. | Hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.531 |
| LP43_0372 | flaG | LP43_0372 | LP43_0617 | Hypothetical protein. | Flagellin protein FlaG. | 0.598 |
| LP43_0585 | LP43_0888 | LP43_0585 | LP43_0888 | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Hypothetical protein. | 0.657 |
| LP43_0585 | LP43_0939 | LP43_0585 | LP43_0939 | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | CheW domain protein. | 0.722 |
| LP43_0585 | LP43_1593 | LP43_0585 | LP43_1593 | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Positive regulator of CheA protein activity (CheW). | 0.778 |
| LP43_0585 | LP43_1884 | LP43_0585 | LP43_1884 | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.914 |
| LP43_0888 | LP43_0293 | LP43_0888 | LP43_0293 | Hypothetical protein. | Pentapeptide repeat domain protein. | 0.589 |
| LP43_0888 | LP43_0585 | LP43_0888 | LP43_0585 | Hypothetical protein. | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.657 |
| LP43_0888 | LP43_0939 | LP43_0888 | LP43_0939 | Hypothetical protein. | CheW domain protein. | 0.626 |
| LP43_0888 | LP43_1593 | LP43_0888 | LP43_1593 | Hypothetical protein. | Positive regulator of CheA protein activity (CheW). | 0.501 |
| LP43_0888 | LP43_1884 | LP43_0888 | LP43_1884 | Hypothetical protein. | Hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.619 |
| LP43_0888 | flaG | LP43_0888 | LP43_0617 | Hypothetical protein. | Flagellin protein FlaG. | 0.444 |
| LP43_0888 | fliL-2 | LP43_0888 | LP43_0959 | Hypothetical protein. | Flagellar biosynthesis protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.527 |
| LP43_0939 | LP43_0372 | LP43_0939 | LP43_0372 | CheW domain protein. | Hypothetical protein. | 0.402 |
| LP43_0939 | LP43_0585 | LP43_0939 | LP43_0585 | CheW domain protein. | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.722 |
| LP43_0939 | LP43_0888 | LP43_0939 | LP43_0888 | CheW domain protein. | Hypothetical protein. | 0.626 |
| LP43_0939 | LP43_1593 | LP43_0939 | LP43_1593 | CheW domain protein. | Positive regulator of CheA protein activity (CheW). | 0.839 |
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