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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LP43_1995Pseudoazurin. (141 aa)    
Predicted Functional Partners:
LP43_0109
Multicopper oxidase.
   
  0.809
mauA
Methylamine dehydrogenase light chain precursor; Belongs to the aromatic amine dehydrogenase light chain family.
   
   0.645
mauB
Methylamine dehydrogenase heavy chain precursor.
    
   0.643
LP43_1870
Cytochrome c oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
 0.639
LP43_1993
Hypothetical protein.
    
  0.561
LP43_1994
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
    
  0.561
LP43_1008
NADH-ubiquinone oxidoreductase chain M.
    
   0.465
mxaE
Collagen triple helix repeat domain protein.
   
   0.431
LP43_0648
Hypothetical protein.
   
   0.431
LP43_2251
Hypothetical protein.
    
   0.431
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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