Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LP43_2162Glycosyl transferase, family 2. (224 aa)    
Predicted Functional Partners:
LP43_2163
Hypothetical protein.
     0.993
LP43_2159
Radical SAM domain protein.
 
     0.939
LP43_2160
FAD-dependent NAD(P)-disulfide oxidoreductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
   
 0.918
LP43_2161
Hypothetical protein.
 
     0.910
LP43_2158
SAM-dependent methyltransferase SCO3452.
 
 
  0.875
LP43_2164
Hypothetical protein.
       0.693
LP43_2168
Putative sterol desaturase.
 
 
   0.601
LP43_0559
InaA protein.
  
   0.428
LP43_2156
Macrophage infectivity potentiator-related protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.427
LP43_2165
Metallo-beta-lactamase family protein.
       0.423
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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