Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LP43_2340Acyl carrier protein associated with anthrachelin biosynthesis. (86 aa)    
Predicted Functional Partners:
LP43_2339
Long-chain-fatty-acid--CoA ligase.
       0.773
LP43_2341
Hypothetical protein.
       0.773
LP43_2342
Hypothetical protein.
       0.762
LP43_2337
Anthrachelin biosynthesis protein AsbA/Siderophore synthetase superfamily, group A/Siderophore synthetase large component, acetyltransferase.
       0.732
LP43_2338
Anthrachelin biosynthesis protein AsbB/Siderophore synthetase superfamily, group C/Siderophore synthetase component, ligase.
       0.732
LP43_2336
MDR extrusion protein (Na(+)/drug antiporter), MATE family.
       0.474
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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