Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LP43_2399Periplasmic thiol:disulfide interchange protein DsbA. (210 aa)    
Predicted Functional Partners:
LP43_1806
Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
 
  
 0.795
LP43_2400
Cytochrome c-type biogenesis protein CcsA/ResC.
       0.754
LP43_1671
Arsenate reductase.
    
   0.633
LP43_1741
Glutathione-dependent thiol reductase; Belongs to the ArsC family.
    
   0.633
LP43_2402
Cytochrome c4.
 
     0.612
LP43_2401
Cytochrome c-type biogenesis protein Ccs1/ResB.
       0.562
LP43_0520
Stringent starvation protein B.
  
     0.533
dsbB
Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.
 
  
 0.514
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.512
flgD
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.512
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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