Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Swit_0253 | Swit_0254 | TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase. | Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family. | 0.793 |
Swit_0253 | Swit_0255 | TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase. | Hypothetical protein. | 0.566 |
Swit_0253 | Swit_0256 | TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase. | PFAM: glycosyl transferase, family 2. | 0.498 |
Swit_0254 | Swit_0253 | Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family. | TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase. | 0.793 |
Swit_0254 | Swit_0255 | Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.566 |
Swit_0254 | Swit_0256 | Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family. | PFAM: glycosyl transferase, family 2. | 0.498 |
Swit_0255 | Swit_0253 | Hypothetical protein. | TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase. | 0.566 |
Swit_0255 | Swit_0254 | Hypothetical protein. | Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family. | 0.566 |
Swit_0255 | Swit_0256 | Hypothetical protein. | PFAM: glycosyl transferase, family 2. | 0.771 |
Swit_0255 | Swit_3236 | Hypothetical protein. | PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | 0.415 |
Swit_0255 | Swit_3966 | Hypothetical protein. | Hypothetical protein. | 0.522 |
Swit_0256 | Swit_0253 | PFAM: glycosyl transferase, family 2. | TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase. | 0.498 |
Swit_0256 | Swit_0254 | PFAM: glycosyl transferase, family 2. | Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family. | 0.498 |
Swit_0256 | Swit_0255 | PFAM: glycosyl transferase, family 2. | Hypothetical protein. | 0.771 |
Swit_3236 | Swit_0255 | PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | Hypothetical protein. | 0.415 |
Swit_3966 | Swit_0255 | Hypothetical protein. | Hypothetical protein. | 0.522 |