STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swit_0545Hypothetical protein. (59 aa)    
Predicted Functional Partners:
Swit_0071
Hypothetical protein.
      
 0.542
Swit_2411
PFAM: cytochrome c, class I.
      
 0.529
Swit_3255
PFAM: cytochrome c, class I.
      
 0.529
Swit_4131
PFAM: cytochrome c, class I.
      
 0.529
Swit_4687
PFAM: cytochrome c, class I.
      
 0.529
Swit_1108
PFAM: Activator of Hsp90 ATPase 1 family protein.
      
 0.510
Swit_2245
PFAM: Glutathione S-transferase, N-terminal domain; Belongs to the GST superfamily.
      
 0.510
Swit_3457
PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Belongs to the GST superfamily.
      
 0.510
Swit_4209
PFAM: glutathione-dependent formaldehyde-activating, GFA.
      
 0.510
Swit_0145
PFAM: Glutathione S-transferase, N-terminal domain.
      
 0.509
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.