Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swit_0691Hypothetical protein. (165 aa)    
Predicted Functional Partners:
Swit_0692
SMART: extracellular solute-binding protein, family 3.
 
  
 0.971
Swit_1001
PFAM: Pyrrolo-quinoline quinone.
 
 
 0.954
Swit_0693
PFAM: Pyrrolo-quinoline quinone.
 
 
 0.953
Swit_0690
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein.
 
 
 0.943
Swit_0700
PFAM: domain of unknown function DUF1745.
 
    0.905
Swit_1441
PFAM: Pyrrolo-quinoline quinone.
 
 
 0.880
Swit_1396
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.816
Swit_0689
Hypothetical protein.
 
  
 0.807
Swit_2227
PFAM: Pyrrolo-quinoline quinone.
 
 
 0.795
Swit_0686
PFAM: beta-lactamase domain protein.
 
   
 0.793
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.