Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swit_0893PFAM: Rieske [2Fe-2S] domain protein. (106 aa)    
Predicted Functional Partners:
Swit_0898
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 0.993
Swit_2251
PFAM: Rieske [2Fe-2S] domain protein.
 
  
  0.977
Swit_2055
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.965
Swit_0890
PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein.
  
 
 0.909
Swit_0895
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
  
 0.849
Swit_0896
PFAM: Rieske [2Fe-2S] domain protein.
  
  
 0.794
Swit_0894
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
     
 0.785
Swit_1987
PFAM: Rieske [2Fe-2S] domain protein.
 
     0.750
Swit_1707
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein.
  
  
 0.596
Swit_0897
PFAM: short-chain dehydrogenase/reductase SDR.
  
  
 0.574
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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