STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swit_0895PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit. (166 aa)    
Predicted Functional Partners:
Swit_3056
Rieske (2Fe-2S) domain protein; PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein.
 
 0.985
Swit_3057
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
  
 
0.927
Swit_0896
PFAM: Rieske [2Fe-2S] domain protein.
 
 
 0.921
Swit_0893
PFAM: Rieske [2Fe-2S] domain protein.
 
  
 0.848
Swit_0894
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.808
Swit_1758
PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein.
 
 
 0.619
Swit_0898
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 0.616
Swit_4280
Rieske (2Fe-2S) domain protein; PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein.
 
 
 0.603
Swit_4281
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
     0.593
Swit_0890
PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein.
 
 
 0.579
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.