Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Swit_0986Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein, AraC type. (329 aa)    
Predicted Functional Partners:
Swit_1622
PFAM: Acetamidase/Formamidase.
      0.588
Swit_0987
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
 
     0.576
Swit_0985
PFAM: regulatory protein, AsnC/Lrp family.
  
  
 0.572
Swit_0309
Transcriptional regulator, AraC family with amidase-like domain; PFAM: helix-turn-helix- domain containing protein, AraC type.
 
 
 0.565
Swit_4177
PFAM: helix-turn-helix- domain containing protein, AraC type.
  
     0.532
Swit_3370
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein, AraC type.
 
 
 0.499
Swit_0326
Transcriptional regulator, AraC family with amidase-like domain; PFAM: helix-turn-helix- domain containing protein, AraC type.
 
 
 0.478
Swit_2039
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein, AraC type.
  
     0.460
Swit_0988
Phenylacetaldoxime dehydratase.
       0.439
Swit_0980
Transcriptional regulator, AraC family; SMART: helix-turn-helix- domain containing protein, AraC type.
 
     0.434
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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