Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swit_1087Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein. (182 aa)    
Predicted Functional Partners:
Swit_1089
Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
   
 0.888
Swit_1088
PFAM: GCN5-related N-acetyltransferase.
     
 0.873
Swit_0240
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
   
 
 0.695
Swit_2233
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
   
 
 0.695
Swit_1090
PFAM: diacylglycerol kinase, catalytic region.
       0.548
Swit_1086
Peptidase M24; PFAM: creatinase; peptidase M24.
  
  
 0.500
Swit_2737
TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3.
  
  
 0.433
Swit_3760
PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein.
  
  
 0.422
Swit_0603
TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3.
  
  
 0.415
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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