Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swit_1189PFAM: Activator of Hsp90 ATPase 1 family protein. (165 aa)    
Predicted Functional Partners:
Swit_1190
Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR.
 
  
 0.970
Swit_0625
Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR; Helix-turn-helix, type 11 domain protein.
 
  
 0.830
Swit_1108
PFAM: Activator of Hsp90 ATPase 1 family protein.
  
     0.770
Swit_0707
PFAM: Activator of Hsp90 ATPase 1 family protein.
 
     0.682
Swit_1194
PFAM: bifunctional deaminase-reductase domain protein.
 
     0.583
Swit_1191
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug.
       0.563
Swit_0489
PFAM: bifunctional deaminase-reductase domain protein.
 
     0.540
Swit_0041
PFAM: Domain of unknown function DUF1801.
 
     0.417
Swit_1192
Hypothetical protein.
       0.414
Swit_1193
PFAM: Di-haem cytochrome c peroxidase.
       0.414
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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