Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swit_1206PFAM: sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (421 aa)    
Predicted Functional Partners:
Swit_1311
TIGRFAM: Succinate dehydrogenase, hydrophobic membrane anchor; PFAM: succinate dehydrogenase, cytochrome b subunit.
  
  
 0.546
Swit_1207
Hypothetical protein.
       0.516
Swit_1208
Hypothetical protein.
       0.503
Swit_4409
Peptidase M24; PFAM: creatinase; peptidase M24.
     
 0.485
Swit_0771
Molecular chaperone-like protein.
   
 0.481
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.477
Swit_1209
PFAM: major facilitator superfamily MFS_1.
     
 0.446
Swit_2131
PFAM: band 7 protein.
   
 0.429
Swit_2355
Band 7 protein; HflC and HflK could regulate a protease.
   
 0.429
Swit_2356
HflK protein; HflC and HflK could encode or regulate a protease.
   
 0.429
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.