Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swit_1374PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (276 aa)    
Predicted Functional Partners:
Swit_1375
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein, AraC type.
 
     0.834
Swit_0352
PFAM: short-chain dehydrogenase/reductase SDR.
 
 
 
 0.637
Swit_0897
PFAM: short-chain dehydrogenase/reductase SDR.
 
 
 
 0.626
Swit_3355
PFAM: short-chain dehydrogenase/reductase SDR; KR.
 
 
 
 0.621
Swit_3638
PFAM: short-chain dehydrogenase/reductase SDR; KR.
 
 
 
 0.617
Swit_0293
PFAM: short-chain dehydrogenase/reductase SDR; KR.
 
 
 
 0.604
Swit_3279
PFAM: short-chain dehydrogenase/reductase SDR; KR.
 
 
 
 0.590
Swit_3291
PFAM: short-chain dehydrogenase/reductase SDR; KR.
 
 
 
 0.584
Swit_3886
PFAM: short-chain dehydrogenase/reductase SDR.
 
 
 
 0.567
Swit_0996
PFAM: short-chain dehydrogenase/reductase SDR; KR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.565
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.