Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swit_1732Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR. (206 aa)    
Predicted Functional Partners:
Swit_2515
PFAM: regulatory protein, TetR.
  
     0.617
Swit_3194
PFAM: FAD dependent oxidoreductase.
  
   
 0.526
Swit_3505
PFAM: TadE family protein.
  
   
 0.483
Swit_1111
Hypothetical protein.
  
  
 0.475
Swit_3662
Hypothetical protein.
  
  
 0.459
Swit_4783
Hypothetical protein.
 
   
 0.457
Swit_1804
PFAM: Endonuclease/exonuclease/phosphatase.
  
  
 0.454
Swit_2421
PFAM: peptidase M61 domain protein.
  
     0.451
Swit_3331
PFAM: Ethyl tert-butyl ether degradation EthD.
  
     0.445
Swit_4873
TIGRFAM: YD repeat protein.
  
     0.437
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.