Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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Swit_1775Amidohydrolase; PFAM: peptidase S9B, dipeptidylpeptidase IV domain protein; amidohydrolase; WD40 domain protein beta Propeller; Amidohydrolase 3. (1010 aa)    
Predicted Functional Partners:
Swit_1774
Amidohydrolase; PFAM: peptidase S9B, dipeptidylpeptidase IV domain protein; amidohydrolase; WD40 domain protein beta Propeller.
 
    
0.788
Swit_0853
PFAM: OmpA domain protein transmembrane region-containing protein; surface antigen msp4 family protein; OmpA/MotB domain protein.
  
 
 0.710
Swit_2278
PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein.
  
 
 0.710
Swit_4507
Uncharacterized protein.
  
  
 0.707
Swit_1776
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug.
     
 0.662
Swit_2751
PFAM: glycosyl transferase, family 2; polysaccharide deacetylase; chitin synthase; SMART: chitinase II.
  
  
 0.517
Swit_0275
PFAM: amidohydrolase; Amidohydrolase 3.
  
     0.514
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.511
Swit_3040
PFAM: peptidase S9, prolyl oligopeptidase active site domain protein.
 
    0.505
hutH
TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase.
  
  
 0.501
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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