Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swit_2067PFAM: Enoyl-CoA hydratase/isomerase. (278 aa)    
Predicted Functional Partners:
Swit_3628
PFAM: acyl-CoA dehydrogenase domain protein.
 
 0.964
Swit_3629
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain.
  
 0.957
Swit_1612
PFAM: Enoyl-CoA hydratase/isomerase.
  
  
 
0.909
Swit_1977
PFAM: Enoyl-CoA hydratase/isomerase.
  
  
 
0.909
Swit_2068
PFAM: Enoyl-CoA hydratase/isomerase.
 
  
0.884
Swit_2066
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain.
  
 0.839
Swit_1711
PFAM: Enoyl-CoA hydratase/isomerase.
 
   0.827
Swit_2898
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 0.815
Swit_0735
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
 0.814
Swit_0368
PFAM: Enoyl-CoA hydratase/isomerase.
 
   0.796
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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