Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Swit_0704 | Swit_2156 | Swit_0704 | Swit_2156 | PFAM: luciferase family protein. | PFAM: luciferase family protein. | 0.573 |
Swit_1444 | Swit_2156 | Swit_1444 | Swit_2156 | PFAM: luciferase family protein. | PFAM: luciferase family protein. | 0.642 |
Swit_2154 | Swit_2155 | Swit_2154 | Swit_2155 | PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein. | Hypothetical protein. | 0.814 |
Swit_2154 | Swit_2156 | Swit_2154 | Swit_2156 | PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein. | PFAM: luciferase family protein. | 0.418 |
Swit_2155 | Swit_2154 | Swit_2155 | Swit_2154 | Hypothetical protein. | PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein. | 0.814 |
Swit_2155 | Swit_2156 | Swit_2155 | Swit_2156 | Hypothetical protein. | PFAM: luciferase family protein. | 0.418 |
Swit_2156 | Swit_0704 | Swit_2156 | Swit_0704 | PFAM: luciferase family protein. | PFAM: luciferase family protein. | 0.573 |
Swit_2156 | Swit_1444 | Swit_2156 | Swit_1444 | PFAM: luciferase family protein. | PFAM: luciferase family protein. | 0.642 |
Swit_2156 | Swit_2154 | Swit_2156 | Swit_2154 | PFAM: luciferase family protein. | PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein. | 0.418 |
Swit_2156 | Swit_2155 | Swit_2156 | Swit_2155 | PFAM: luciferase family protein. | Hypothetical protein. | 0.418 |
Swit_2156 | Swit_2912 | Swit_2156 | Swit_2912 | PFAM: luciferase family protein. | Pyrimidine 5'-nucleotidase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase. | 0.529 |
Swit_2156 | Swit_3598 | Swit_2156 | Swit_3598 | PFAM: luciferase family protein. | PFAM: DSBA oxidoreductase. | 0.428 |
Swit_2156 | dapD | Swit_2156 | Swit_2911 | PFAM: luciferase family protein. | TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | 0.529 |
Swit_2912 | Swit_2156 | Swit_2912 | Swit_2156 | Pyrimidine 5'-nucleotidase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase. | PFAM: luciferase family protein. | 0.529 |
Swit_2912 | dapD | Swit_2912 | Swit_2911 | Pyrimidine 5'-nucleotidase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase. | TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | 0.850 |
Swit_3598 | Swit_2156 | Swit_3598 | Swit_2156 | PFAM: DSBA oxidoreductase. | PFAM: luciferase family protein. | 0.428 |
dapD | Swit_2156 | Swit_2911 | Swit_2156 | TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | PFAM: luciferase family protein. | 0.529 |
dapD | Swit_2912 | Swit_2911 | Swit_2912 | TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family. | Pyrimidine 5'-nucleotidase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase. | 0.850 |