STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swit_2167Hypothetical protein. (288 aa)    
Predicted Functional Partners:
Swit_2368
TIGRFAM: Methanolan biosynthesis EpsI.
 
     0.772
Swit_2367
TIGRFAM: eight transmembrane protein EpsH.
 
 
   0.744
Swit_3571
Hypothetical protein.
 
   
 0.592
Swit_4028
Hypothetical protein.
 
  
 0.561
Swit_0024
PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type.
  
 0.529
Swit_1716
Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family-like protein.
  
 0.529
Swit_2489
PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type.
  
 0.529
Swit_3383
Hypothetical protein.
  
 0.529
Swit_3531
Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.529
Swit_4108
PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type.
  
 0.529
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.