Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swit_2281Transcriptional regulator, HxlR family; PFAM: helix-turn-helix, HxlR type. (124 aa)    
Predicted Functional Partners:
Swit_2572
Transcriptional regulator, HxlR family; PFAM: helix-turn-helix, HxlR type.
  
     0.683
azoR-2
NAD(P)H dehydrogenase (quinone); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
     
 0.625
Swit_2280
Hypothetical protein.
       0.564
Swit_2279
PFAM: Enoyl-CoA hydratase/isomerase.
     
 0.557
Swit_1002
PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein.
 
   
 0.474
Swit_3386
Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein.
   
    0.430
Swit_4881
Transcriptional modulator of MazE/toxin, MazF.
   
    0.430
Swit_0523
PFAM: GCN5-related N-acetyltransferase.
 
  
 0.406
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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