Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swit_3363PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein. (333 aa)    
Predicted Functional Partners:
Swit_3361
PFAM: Stress responsive alpha-beta barrel domain protein.
       0.773
Swit_3362
Hypothetical protein.
       0.773
Swit_0152
PFAM: Alcohol dehydrogenase, zinc-binding domain protein.
 
 
 0.719
Swit_1442
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein.
 
  
 0.604
Swit_3364
PFAM: short-chain dehydrogenase/reductase SDR; KR.
  
 
 0.591
Swit_3365
PFAM: NAD-dependent epimerase/dehydratase.
  
  
 0.518
Swit_3635
PFAM: MaoC domain protein dehydratase.
 
 
 0.511
Swit_4202
PFAM: Alcohol dehydrogenase, zinc-binding domain protein.
 
 
0.505
Swit_3300
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein.
 
  
 0.466
Swit_3018
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein.
 
  
0.411
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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