Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swit_3380PFAM: glycosyl transferase, family 2. (224 aa)    
Predicted Functional Partners:
Swit_3377
Hypothetical protein.
 
  
 0.843
Swit_3379
PFAM: glycosyl transferase, family 2.
 
    
0.835
Swit_4535
PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1.
 
  
 0.805
Swit_3378
PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.803
Swit_3381
Hpr(Ser) kinase/phosphatase.
       0.773
Swit_3382
Hypothetical protein.
       0.773
Swit_4525
PFAM: glycosyl transferase, family 2.
  
     0.761
Swit_4009
PFAM: glycosyl transferase, group 1; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
 
 
 0.690
Swit_3439
PFAM: sugar transferase.
 
  
 0.638
Swit_2371
PFAM: sugar transferase.
 
  
 0.623
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.