Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Swit_3381Hpr(Ser) kinase/phosphatase. (333 aa)    
Predicted Functional Partners:
Swit_3382
Hypothetical protein.
 
     0.948
Swit_3377
Hypothetical protein.
 
     0.930
Swit_3379
PFAM: glycosyl transferase, family 2.
 
     0.812
Swit_3378
PFAM: ABC transporter related; SMART: AAA ATPase.
       0.781
Swit_3380
PFAM: glycosyl transferase, family 2.
       0.773
Swit_3383
Hypothetical protein.
       0.502
Swit_3384
PFAM: Resolvase, N-terminal domain; Recombinase.
       0.501
Swit_3385
Hypothetical protein.
       0.467
Swit_1879
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase.
 
 
 
 0.460
Swit_3733
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein.
  
  
 0.414
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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