STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swit_4174Rieske (2Fe-2S) domain protein; PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein. (440 aa)    
Predicted Functional Partners:
Swit_4175
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.966
Swit_1875
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.872
Swit_1532
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.867
Swit_0889
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.863
Swit_1757
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.862
Swit_2635
2-chlorobenzoate 1,2-dioxygenase; PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.851
Swit_4281
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.840
Swit_0743
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.810
Swit_4189
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
 
 0.775
Swit_4173
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug.
       0.658
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.