STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swit_4346PFAM: oxidoreductase, molybdopterin binding. (233 aa)    
Predicted Functional Partners:
Swit_4345
Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)-like protein.
  
 0.915
Swit_0564
Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)-like protein.
  
 0.907
Swit_0948
Hypothetical protein.
 
 
 
 0.637
Swit_1001
PFAM: Pyrrolo-quinoline quinone.
   
 
 0.571
Swit_3727
Hypothetical protein.
   
 
 0.540
Swit_1434
Nitric oxide dioxygenase; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; MOSC domain containing protein; Oxidoreductase FAD-binding domain protein.
 
  
 0.514
Swit_2411
PFAM: cytochrome c, class I.
  
 
 0.468
Swit_3217
Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
 
 
 0.468
Swit_3255
PFAM: cytochrome c, class I.
  
 
 0.468
Swit_4131
PFAM: cytochrome c, class I.
  
 
 0.468
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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