STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swit_4364TIGRFAM: methylamine dehydrogenase accessory protein MauD; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein. (266 aa)    
Predicted Functional Partners:
Swit_4365
Amine dehydrogenase; Methylamine dehydrogenase carries out the oxidation of methylamine. Electrons are passed from methylamine dehydrogenase to amicyanin; Belongs to the aromatic amine dehydrogenase light chain family.
 
   
 0.933
Swit_4367
Hypothetical protein.
 
 
 
 0.920
Swit_4366
PFAM: cytochrome c, class I.
 
 
 
 0.909
Swit_4363
PFAM: methylamine dehydrogenase heavy subunit.
 
   
 0.874
Swit_3253
Hypothetical protein.
 
  
 0.843
Swit_3250
Hypothetical protein.
 
 
 
 0.817
Swit_3251
Amine dehydrogenase; Methylamine dehydrogenase carries out the oxidation of methylamine. Electrons are passed from methylamine dehydrogenase to amicyanin; Belongs to the aromatic amine dehydrogenase light chain family.
 
   
 0.797
Swit_3254
PFAM: methylamine dehydrogenase heavy subunit.
 
   
 0.796
Swit_4362
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR.
 
   
 0.791
Swit_0542
PFAM: cytochrome c biogenesis protein, transmembrane region.
  
 
 0.790
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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