Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swit_4428PFAM: Sel1 domain protein repeat-containing protein. (88 aa)    
Predicted Functional Partners:
Swit_1270
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; Belongs to the flagella basal body rod proteins family.
  
 
 0.711
Swit_0575
Uncharacterized protein.
  
     0.707
Swit_3147
Uncharacterized protein.
  
     0.658
Swit_4404
Uncharacterized protein.
  
     0.649
Swit_0616
PFAM: Flp/Fap pilin component.
  
     0.592
Swit_4750
PFAM: protein of unknown function DUF1153.
  
     0.579
Swit_3002
PFAM: protein of unknown function DUF1467.
  
     0.578
Swit_1503
PFAM: Autotransporter beta- domain protein.
 
     0.550
Swit_4870
PFAM: peptidase A24A, prepilin type IV.
  
   
 0.546
Swit_4429
Hypothetical protein.
       0.509
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.