Swit_4565 protein (Sphingomonas wittichii) - STRING interaction network

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[Homology]

Score

Swit_4565

PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family. (253 aa)

Predicted Functional Partners:

Swit_0298

0.719

Swit_2924

0.689

Swit_2533

0.648

Swit_4566

0.632

Swit_4564

0.594

gyrA

0.489

Swit_2443

0.482

Your Current Organism:

Sphingomonas wittichii

NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Swit_0298	Swit_2533	Swit_0298	Swit_2533	PFAM: major facilitator superfamily MFS_1.	PFAM: major facilitator superfamily MFS_1.	0.526
Swit_0298	Swit_4565	Swit_0298	Swit_4565	PFAM: major facilitator superfamily MFS_1.	PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family.	0.719
Swit_2443	Swit_4565	Swit_2443	Swit_4565	TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein.	PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family.	0.482
Swit_2443	gyrA	Swit_2443	Swit_4563	TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein.	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.419
Swit_2533	Swit_0298	Swit_2533	Swit_0298	PFAM: major facilitator superfamily MFS_1.	PFAM: major facilitator superfamily MFS_1.	0.526
Swit_2533	Swit_4565	Swit_2533	Swit_4565	PFAM: major facilitator superfamily MFS_1.	PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family.	0.648
Swit_2924	Swit_4565	Swit_2924	Swit_4565	PFAM: major facilitator superfamily MFS_1.	PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family.	0.689
Swit_4564	Swit_4565	Swit_4564	Swit_4565	Hypothetical protein.	PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family.	0.594
Swit_4564	gyrA	Swit_4564	Swit_4563	Hypothetical protein.	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.441
Swit_4565	Swit_0298	Swit_4565	Swit_0298	PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family.	PFAM: major facilitator superfamily MFS_1.	0.719
Swit_4565	Swit_2443	Swit_4565	Swit_2443	PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family.	TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein.	0.482
Swit_4565	Swit_2533	Swit_4565	Swit_2533	PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family.	PFAM: major facilitator superfamily MFS_1.	0.648
Swit_4565	Swit_2924	Swit_4565	Swit_2924	PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family.	PFAM: major facilitator superfamily MFS_1.	0.689
Swit_4565	Swit_4564	Swit_4565	Swit_4564	PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family.	Hypothetical protein.	0.594
Swit_4565	Swit_4566	Swit_4565	Swit_4566	PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family.	Hypothetical protein.	0.632
Swit_4565	gyrA	Swit_4565	Swit_4563	PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family.	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.489
Swit_4566	Swit_4565	Swit_4566	Swit_4565	Hypothetical protein.	PFAM: protein of unknown function DUF328; Belongs to the UPF0246 family.	0.632
Swit_4566	gyrA	Swit_4566	Swit_4563	Hypothetical protein.	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.613
gyrA	Swit_2443	Swit_4563	Swit_2443	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein.	0.419
gyrA	Swit_4564	Swit_4563	Swit_4564	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	Hypothetical protein.	0.441

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