Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swit_4569PFAM: NADPH-dependent FMN reductase. (186 aa)    
Predicted Functional Partners:
Swit_4570
PFAM: Pirin domain protein domain protein; Pirin domain protein; Belongs to the pirin family.
  
  
 0.810
Swit_4572
PFAM: isochorismatase hydrolase.
     
 0.746
Swit_4571
Acetyltransferase-like protein.
       0.709
Swit_3598
PFAM: DSBA oxidoreductase.
 
    0.565
Swit_0234
PFAM: Glutathione S-transferase, N-terminal domain; Belongs to the GST superfamily.
  
  
 0.414
Swit_1664
PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Belongs to the GST superfamily.
  
  
 0.414
Swit_3457
PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Belongs to the GST superfamily.
  
  
 0.414
Swit_4163
PFAM: Glutathione S-transferase, N-terminal domain.
  
  
 0.414
Swit_1548
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
  
  
 0.401
Swit_1704
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
  
  
 0.401
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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