Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swit_4587PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase. (261 aa)    
Predicted Functional Partners:
Swit_4586
PFAM: 3-demethylubiquinone-9 3-methyltransferase.
 
     0.873
Swit_2435
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.609
Swit_4584
PFAM: protein of unknown function DUF1058.
       0.487
Swit_4585
PFAM: GCN5-related N-acetyltransferase.
       0.487
Swit_1108
PFAM: Activator of Hsp90 ATPase 1 family protein.
       0.475
Swit_2159
PFAM: protein of unknown function DUF1428.
       0.475
Swit_2570
PFAM: Glutathione S-transferase, N-terminal domain.
       0.475
Swit_2883
PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Belongs to the GST superfamily.
       0.474
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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