Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swit_4613TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; major facilitator superfamily MFS_1. (445 aa)    
Predicted Functional Partners:
Swit_4612
PFAM: beta-lactamase.
       0.826
Swit_4611
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug.
       0.773
Swit_4610
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein.
       0.543
Swit_1156
PFAM: Peptidase M1, membrane alanine aminopeptidase-like.
 
 
 0.513
Swit_2567
PFAM: amino acid permease-associated region.
 
 
 
 0.488
Swit_4411
PFAM: amino acid permease-associated region.
 
 
 
 0.488
Swit_2418
PFAM: amino acid permease-associated region.
 
 
 
 0.486
Swit_0683
PFAM: amino acid permease-associated region.
  
   
 0.459
Swit_0514
Endothelin-converting enzyme 1; PFAM: peptidase M13, neprilysin; peptidase M13.
 
  
 0.442
Swit_0536
PFAM: amino acid permease-associated region.
 
 
 
 0.433
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
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