Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swit_4739Hypothetical protein. (416 aa)    
Predicted Functional Partners:
Swit_1309
PFAM: Nucleotidyl transferase.
 
  
 0.793
Swit_2493
PFAM: polysaccharide biosynthesis protein.
 
  
 0.790
Swit_2497
PFAM: Nucleotidyl transferase.
 
  
 0.785
Swit_1306
Hypothetical protein.
 
   
 0.770
Swit_3902
Hypothetical protein.
 
     0.762
Swit_1307
Hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
   
 0.738
Swit_3903
PFAM: diacylglycerol kinase, catalytic region.
 
     0.711
Swit_1308
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase-like protein.
 
     0.707
Swit_1807
PFAM: glycosyl transferase, group 1.
 
  
 0.695
Swit_0689
Hypothetical protein.
  
     0.609
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.