Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Swit_47642-octaprenylphenol hydroxylase; PFAM: ABC-1 domain protein. (501 aa)    
Predicted Functional Partners:
Swit_2449
TIGRFAM: rpsU-divergently transcribed protein; PFAM: COQ9 domain protein.
   
 0.804
Swit_4765
Uncharacterized protein.
       0.781
Swit_3664
TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding.
 0.657
coq7
Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 0.618
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
 
 
 0.572
Swit_4766
Hypothetical protein.
       0.567
Swit_0827
PFAM: NADH:flavin oxidoreductase/NADH oxidase; monooxygenase, FAD-binding.
  
 0.561
Swit_0456
PFAM: monooxygenase, FAD-binding; tryptophan halogenase.
  
 0.547
Swit_4767
PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein.
 
 
 
 0.544
Swit_1438
PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase.
  
 0.540
Your Current Organism:
Sphingomonas wittichii
NCBI taxonomy Id: 392499
Other names: S. wittichii RW1, Sphingomonas sp. RW1, Sphingomonas wittichii DSM 6014, Sphingomonas wittichii RW1, Sphingomonas wittichii str. RW1, Sphingomonas wittichii strain RW1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.