Swoo_0039 protein (Shewanella woodyi) - STRING interaction network

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Score

Swoo_0039

PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM. (369 aa)

Predicted Functional Partners:

Swoo_0339

0.963

Swoo_0337

0.907

Swoo_0336

0.904

Swoo_0335

0.901

Swoo_0338

0.772

Swoo_1984

0.752

Swoo_2624

0.733

Swoo_2625

0.691

smg

0.690

Swoo_1299

0.674

Your Current Organism:

Shewanella woodyi

NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Swoo_0039	Swoo_0335	Swoo_0039	Swoo_0335	PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM.	TIGRFAM: type IV pilus assembly protein PilM; KEGG: sse:Ssed_4270 type IV pilus assembly protein PilM.	0.901
Swoo_0039	Swoo_0336	Swoo_0039	Swoo_0336	PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM.	PFAM: Fimbrial assembly family protein; KEGG: sse:Ssed_4269 fimbrial assembly family protein.	0.904
Swoo_0039	Swoo_0337	Swoo_0039	Swoo_0337	PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM.	PFAM: Pilus assembly protein PilO; KEGG: sse:Ssed_4268 pilus assembly protein, PilO.	0.907
Swoo_0039	Swoo_0338	Swoo_0039	Swoo_0338	PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM.	PFAM: Pilus assembly protein PilP; KEGG: sse:Ssed_4267 methyl-accepting chemotaxis sensory transducer.	0.772
Swoo_0039	Swoo_0339	Swoo_0039	Swoo_0339	PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM.	TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: sse:Ssed_4266 type IV pilus secretin PilQ.	0.963
Swoo_0039	Swoo_1299	Swoo_0039	Swoo_1299	PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM.	Type IV pilus biogenesis protein PilE; KEGG: sdn:Sden_2715 methylation.	0.674
Swoo_0039	Swoo_1984	Swoo_0039	Swoo_1984	PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM.	PFAM: type IV pilus assembly PilZ; KEGG: sse:Ssed_2646 type IV pilus assembly PilZ.	0.752
Swoo_0039	Swoo_2624	Swoo_0039	Swoo_2624	PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM.	PFAM: protein of unknown function DUF58; KEGG: sse:Ssed_1966 protein of unknown function DUF58.	0.733
Swoo_0039	Swoo_2625	Swoo_0039	Swoo_2625	PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM.	PFAM: transglutaminase domain protein; KEGG: sse:Ssed_1965 transglutaminase domain protein.	0.691
Swoo_0039	smg	Swoo_0039	Swoo_0041	PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM.	PFAM: protein of unknown function DUF494; KEGG: sse:Ssed_0038 protein of unknown function DUF494; Belongs to the Smg family.	0.690
Swoo_0335	Swoo_0039	Swoo_0335	Swoo_0039	TIGRFAM: type IV pilus assembly protein PilM; KEGG: sse:Ssed_4270 type IV pilus assembly protein PilM.	PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM.	0.901
Swoo_0335	Swoo_0336	Swoo_0335	Swoo_0336	TIGRFAM: type IV pilus assembly protein PilM; KEGG: sse:Ssed_4270 type IV pilus assembly protein PilM.	PFAM: Fimbrial assembly family protein; KEGG: sse:Ssed_4269 fimbrial assembly family protein.	0.998
Swoo_0335	Swoo_0337	Swoo_0335	Swoo_0337	TIGRFAM: type IV pilus assembly protein PilM; KEGG: sse:Ssed_4270 type IV pilus assembly protein PilM.	PFAM: Pilus assembly protein PilO; KEGG: sse:Ssed_4268 pilus assembly protein, PilO.	0.994
Swoo_0335	Swoo_0338	Swoo_0335	Swoo_0338	TIGRFAM: type IV pilus assembly protein PilM; KEGG: sse:Ssed_4270 type IV pilus assembly protein PilM.	PFAM: Pilus assembly protein PilP; KEGG: sse:Ssed_4267 methyl-accepting chemotaxis sensory transducer.	0.984
Swoo_0335	Swoo_0339	Swoo_0335	Swoo_0339	TIGRFAM: type IV pilus assembly protein PilM; KEGG: sse:Ssed_4270 type IV pilus assembly protein PilM.	TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: sse:Ssed_4266 type IV pilus secretin PilQ.	0.994
Swoo_0335	Swoo_1299	Swoo_0335	Swoo_1299	TIGRFAM: type IV pilus assembly protein PilM; KEGG: sse:Ssed_4270 type IV pilus assembly protein PilM.	Type IV pilus biogenesis protein PilE; KEGG: sdn:Sden_2715 methylation.	0.863
Swoo_0335	Swoo_1984	Swoo_0335	Swoo_1984	TIGRFAM: type IV pilus assembly protein PilM; KEGG: sse:Ssed_4270 type IV pilus assembly protein PilM.	PFAM: type IV pilus assembly PilZ; KEGG: sse:Ssed_2646 type IV pilus assembly PilZ.	0.856
Swoo_0335	Swoo_2624	Swoo_0335	Swoo_2624	TIGRFAM: type IV pilus assembly protein PilM; KEGG: sse:Ssed_4270 type IV pilus assembly protein PilM.	PFAM: protein of unknown function DUF58; KEGG: sse:Ssed_1966 protein of unknown function DUF58.	0.669
Swoo_0335	Swoo_2625	Swoo_0335	Swoo_2625	TIGRFAM: type IV pilus assembly protein PilM; KEGG: sse:Ssed_4270 type IV pilus assembly protein PilM.	PFAM: transglutaminase domain protein; KEGG: sse:Ssed_1965 transglutaminase domain protein.	0.672
Swoo_0336	Swoo_0039	Swoo_0336	Swoo_0039	PFAM: Fimbrial assembly family protein; KEGG: sse:Ssed_4269 fimbrial assembly family protein.	PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM.	0.904

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