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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swoo_0165PFAM: CheW domain protein; KEGG: sse:Ssed_0185 CheW protein. (183 aa)    
Predicted Functional Partners:
Swoo_0166
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: sse:Ssed_0186 CheA signal transduction histidine kinase.
 
 0.999
Swoo_1638
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: sse:Ssed_3046 CheA signal transduction histidine kinase.
 
 0.998
Swoo_0164
PFAM: chemotaxis sensory transducer; KEGG: sse:Ssed_0184 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor.
 
 0.985
Swoo_1568
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sse:Ssed_3114 methyl-accepting chemotaxis sensory transducer.
 
 0.985
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.984
cheB-2
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.974
Swoo_0163
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
  
 0.967
Swoo_2794
PFAM: chemotaxis sensory transducer; CHASE3 domain protein; KEGG: dps:DP0292 chemotaxis transducer.
 
 0.960
Swoo_1963
PFAM: CheB methylesterase; KEGG: pin:Ping_3721 CheB-type protein glutamate methylesterase.
 
 
 0.959
Swoo_4186
TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: sbn:Sbal195_3908 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor.
 
 0.955
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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