Swoo_1817 protein (Shewanella woodyi) - STRING interaction network

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Swoo_1817

KEGG: slo:Shew_1636 hypothetical protein. (168 aa)

Predicted Functional Partners:

Swoo_1818

0.695

lpxK

0.620

Swoo_1821

0.614

msbA

0.613

Your Current Organism:

Shewanella woodyi

NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Swoo_1817	Swoo_1818	Swoo_1817	Swoo_1818	KEGG: slo:Shew_1636 hypothetical protein.	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sse:Ssed_2827 DNA internalization-related competence protein ComEC/Rec2.	0.695
Swoo_1817	Swoo_1821	Swoo_1817	Swoo_1821	KEGG: slo:Shew_1636 hypothetical protein.	PFAM: protein of unknown function DUF343; KEGG: sse:Ssed_2824 protein of unknown function DUF343; Belongs to the UPF0434 family.	0.614
Swoo_1817	lpxK	Swoo_1817	Swoo_1820	KEGG: slo:Shew_1636 hypothetical protein.	Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).	0.620
Swoo_1817	msbA	Swoo_1817	Swoo_1819	KEGG: slo:Shew_1636 hypothetical protein.	Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.	0.613
Swoo_1818	Swoo_1817	Swoo_1818	Swoo_1817	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sse:Ssed_2827 DNA internalization-related competence protein ComEC/Rec2.	KEGG: slo:Shew_1636 hypothetical protein.	0.695
Swoo_1818	Swoo_1821	Swoo_1818	Swoo_1821	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sse:Ssed_2827 DNA internalization-related competence protein ComEC/Rec2.	PFAM: protein of unknown function DUF343; KEGG: sse:Ssed_2824 protein of unknown function DUF343; Belongs to the UPF0434 family.	0.790
Swoo_1818	lpxK	Swoo_1818	Swoo_1820	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sse:Ssed_2827 DNA internalization-related competence protein ComEC/Rec2.	Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).	0.783
Swoo_1818	msbA	Swoo_1818	Swoo_1819	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sse:Ssed_2827 DNA internalization-related competence protein ComEC/Rec2.	Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.	0.750
Swoo_1821	Swoo_1817	Swoo_1821	Swoo_1817	PFAM: protein of unknown function DUF343; KEGG: sse:Ssed_2824 protein of unknown function DUF343; Belongs to the UPF0434 family.	KEGG: slo:Shew_1636 hypothetical protein.	0.614
Swoo_1821	Swoo_1818	Swoo_1821	Swoo_1818	PFAM: protein of unknown function DUF343; KEGG: sse:Ssed_2824 protein of unknown function DUF343; Belongs to the UPF0434 family.	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sse:Ssed_2827 DNA internalization-related competence protein ComEC/Rec2.	0.790
Swoo_1821	lpxK	Swoo_1821	Swoo_1820	PFAM: protein of unknown function DUF343; KEGG: sse:Ssed_2824 protein of unknown function DUF343; Belongs to the UPF0434 family.	Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).	0.866
Swoo_1821	msbA	Swoo_1821	Swoo_1819	PFAM: protein of unknown function DUF343; KEGG: sse:Ssed_2824 protein of unknown function DUF343; Belongs to the UPF0434 family.	Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.	0.834
lpxK	Swoo_1817	Swoo_1820	Swoo_1817	Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).	KEGG: slo:Shew_1636 hypothetical protein.	0.620
lpxK	Swoo_1818	Swoo_1820	Swoo_1818	Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sse:Ssed_2827 DNA internalization-related competence protein ComEC/Rec2.	0.783
lpxK	Swoo_1821	Swoo_1820	Swoo_1821	Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).	PFAM: protein of unknown function DUF343; KEGG: sse:Ssed_2824 protein of unknown function DUF343; Belongs to the UPF0434 family.	0.866
lpxK	msbA	Swoo_1820	Swoo_1819	Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).	Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.	0.932
msbA	Swoo_1817	Swoo_1819	Swoo_1817	Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.	KEGG: slo:Shew_1636 hypothetical protein.	0.613
msbA	Swoo_1818	Swoo_1819	Swoo_1818	Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sse:Ssed_2827 DNA internalization-related competence protein ComEC/Rec2.	0.750
msbA	Swoo_1821	Swoo_1819	Swoo_1821	Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.	PFAM: protein of unknown function DUF343; KEGG: sse:Ssed_2824 protein of unknown function DUF343; Belongs to the UPF0434 family.	0.834
msbA	lpxK	Swoo_1819	Swoo_1820	Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.	Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).	0.932

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