Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Swoo_1989Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. (123 aa)    
Predicted Functional Partners:
Swoo_3276
PFAM: phosphatidate cytidylyltransferase; KEGG: sse:Ssed_3156 phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.916
Swoo_4331
KEGG: sse:Ssed_0619 1-acylglycerol-3-phosphate O-acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.903
Swoo_3176
PFAM: alpha/beta hydrolase fold; KEGG: sdn:Sden_1098 alpha/beta hydrolase fold.
     
 0.900
Swoo_4259
PFAM: PGAP1 family protein; KEGG: sse:Ssed_0705 lipase-like protein.
     
 0.900
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: slo:Shew_3803 glycerol-3-phosphate dehydrogenase (NAD(P)(+)).
     
 0.834
Swoo_0935
PFAM: FAD dependent oxidoreductase; KEGG: sse:Ssed_0836 FAD dependent oxidoreductase.
    
  0.802
Swoo_4358
PFAM: FAD dependent oxidoreductase; KEGG: sse:Ssed_0595 FAD dependent oxidoreductase.
    
  0.802
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.726
Swoo_2532
PFAM: sulfatase; protein of unknown function DUF1705; KEGG: slo:Shew_2041 protein of unknown function DUF1705.
 
   
 0.645
Swoo_1990
PFAM: ATP dependent DNA ligase; KEGG: sse:Ssed_2639 ATP dependent DNA ligase.
       0.482
Your Current Organism:
Shewanella woodyi
NCBI taxonomy Id: 392500
Other names: S. woodyi ATCC 51908, Shewanella woodyi ATCC 51908, Shewanella woodyi str. ATCC 51908, Shewanella woodyi strain ATCC 51908
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